#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
T5A      T5A 'P1-(5"-ADENOSYL)P5-(5"-THYMIDYL)PENT' non-polymer        85  55 M
#
data_comp_T5A
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
 T5A           BN1    N    .         0.000
 T5A           BC6    C    .         0.000
 T5A           BC2    C    .         0.000
 T5A           BO2    O    .         0.000
 T5A           BN3    N    .         0.000
 T5A           BC4    C    .         0.000
 T5A           BO4    O    .         0.000
 T5A           BC5    C    .         0.000
 T5A           BC7    C    .         0.000
 T5A           BC5*   C    .         0.000
 T5A           BC4*   C    .         0.000
 T5A           BO4*   O    .         0.000
 T5A           BC1*   C    .         0.000
 T5A           BC2*   C    .         0.000
 T5A           BC3*   C    .         0.000
 T5A           BO3*   O    .         0.000
 T5A           PA     P    .         0.000
 T5A           O1A    O    .         0.000
 T5A           O2A    O    .         0.000
 T5A           BO5*   O    .         0.000
 T5A           O3A    O    .         0.000
 T5A           PB     P    .         0.000
 T5A           O1B    O    .         0.000
 T5A           O2B    O    .         0.000
 T5A           O3B    O    .         0.000
 T5A           PC     P    .         0.000
 T5A           O1C    O    .         0.000
 T5A           O2C    O    .         0.000
 T5A           O3C    O    .         0.000
 T5A           PD     P    .         0.000
 T5A           O1D    O    .         0.000
 T5A           O2D    O    .         0.000
 T5A           O3D    O    .         0.000
 T5A           PE     P    .         0.000
 T5A           O1E    O    .         0.000
 T5A           O2E    O    .         0.000
 T5A           AO5*   O    .         0.000
 T5A           AC5*   C    .         0.000
 T5A           AC4*   C    .         0.000
 T5A           AO4*   O    .         0.000
 T5A           AC1*   C    .         0.000
 T5A           AC2*   C    .         0.000
 T5A           AO2*   O    .         0.000
 T5A           AC3*   C    .         0.000
 T5A           AO3*   O    .         0.000
 T5A           AN9    N    .         0.000
 T5A           AC4    C    .         0.000
 T5A           AN3    N    .         0.000
 T5A           AC2    C    .         0.000
 T5A           AN1    N    .         0.000
 T5A           AC6    C    .         0.000
 T5A           AN6    N    .         0.000
 T5A           AC5    C    .         0.000
 T5A           AN7    N    .         0.000
 T5A           AC8    C    .         0.000
 T5A           HB6    H    .         0.000
 T5A           HN3    H    .         0.000
 T5A           HB71   H    .         0.000
 T5A           HB72   H    .         0.000
 T5A           HB73   H    .         0.000
 T5A           HB51   H    .         0.000
 T5A           HB52   H    .         0.000
 T5A           HB4    H    .         0.000
 T5A           HB1    H    .         0.000
 T5A           HB21   H    .         0.000
 T5A           HB22   H    .         0.000
 T5A           HB3    H    .         0.000
 T5A           HB*3   H    .         0.000
 T5A           AHO1   H    .         0.000
 T5A           BHO2   H    .         0.000
 T5A           CHO2   H    .         0.000
 T5A           DHO1   H    .         0.000
 T5A           EHO1   H    .         0.000
 T5A           HA51   H    .         0.000
 T5A           HA52   H    .         0.000
 T5A           HA4    H    .         0.000
 T5A           HA1    H    .         0.000
 T5A           HC2    H    .         0.000
 T5A           HO2    H    .         0.000
 T5A           HC3    H    .         0.000
 T5A           HA3    H    .         0.000
 T5A           HA2    H    .         0.000
 T5A           HA61   H    .         0.000
 T5A           HA62   H    .         0.000
 T5A           HA8    H    .         0.000
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
 T5A        BN1    BC6       single
 T5A        BN1    BC2       single
 T5A        BN1    BC1*      single
 T5A        BC6    BC5       double
 T5A        BC6    HB6       single
 T5A        BC2    BO2       double
 T5A        BC2    BN3       single
 T5A        BN3    BC4       single
 T5A        BN3    HN3       single
 T5A        BC4    BO4       double
 T5A        BC4    BC5       single
 T5A        BC5    BC7       single
 T5A        BC7    HB71      single
 T5A        BC7    HB72      single
 T5A        BC7    HB73      single
 T5A        BC5*   BC4*      single
 T5A        BC5*   BO5*      single
 T5A        BC5*   HB51      single
 T5A        BC5*   HB52      single
 T5A        BC4*   BO4*      single
 T5A        BC4*   BC3*      single
 T5A        BC4*   HB4       single
 T5A        BO4*   BC1*      single
 T5A        BC1*   BC2*      single
 T5A        BC1*   HB1       single
 T5A        BC2*   BC3*      single
 T5A        BC2*   HB21      single
 T5A        BC2*   HB22      single
 T5A        BC3*   BO3*      single
 T5A        BC3*   HB3       single
 T5A        BO3*   HB*3      single
 T5A        PA     O1A       single
 T5A        PA     O2A       double
 T5A        PA     BO5*      single
 T5A        PA     O3A       single
 T5A        O1A    AHO1      single
 T5A        O3A    PB        single
 T5A        PB     O1B       double
 T5A        PB     O2B       single
 T5A        PB     O3B       single
 T5A        O2B    BHO2      single
 T5A        O3B    PC        single
 T5A        PC     O1C       double
 T5A        PC     O2C       single
 T5A        PC     O3C       single
 T5A        O2C    CHO2      single
 T5A        O3C    PD        single
 T5A        PD     O1D       single
 T5A        PD     O2D       double
 T5A        PD     O3D       single
 T5A        O1D    DHO1      single
 T5A        O3D    PE        single
 T5A        PE     O1E       single
 T5A        PE     O2E       double
 T5A        PE     AO5*      single
 T5A        O1E    EHO1      single
 T5A        AO5*   AC5*      single
 T5A        AC5*   AC4*      single
 T5A        AC5*   HA51      single
 T5A        AC5*   HA52      single
 T5A        AC4*   AO4*      single
 T5A        AC4*   AC3*      single
 T5A        AC4*   HA4       single
 T5A        AO4*   AC1*      single
 T5A        AC1*   AC2*      single
 T5A        AC1*   AN9       single
 T5A        AC1*   HA1       single
 T5A        AC2*   AO2*      single
 T5A        AC2*   AC3*      single
 T5A        AC2*   HC2       single
 T5A        AO2*   HO2       single
 T5A        AC3*   AO3*      single
 T5A        AC3*   HC3       single
 T5A        AO3*   HA3       single
 T5A        AN9    AC4       single
 T5A        AN9    AC8       single
 T5A        AC4    AN3       single
 T5A        AC4    AC5       double
 T5A        AN3    AC2       double
 T5A        AC2    AN1       single
 T5A        AC2    HA2       single
 T5A        AN1    AC6       double
 T5A        AC6    AN6       single
 T5A        AC6    AC5       single
 T5A        AN6    HA61      single
 T5A        AN6    HA62      single
 T5A        AC5    AN7       single
 T5A        AN7    AC8       double
 T5A        AC8    HA8       single