#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
PGD      PGD '2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,' non-polymer        71  47 M
#
data_comp_PGD
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
 PGD           PB     P    .         0.000
 PGD           O1B    O    .         0.000
 PGD           O2B    O    .         0.000
 PGD           O3B    O    .         0.000
 PGD           O3A    O    .         0.000
 PGD           PA     P    .         0.000
 PGD           O1A    O    .         0.000
 PGD           O2A    O    .         0.000
 PGD           'O5''  O    .         0.000
 PGD           'C5''  C    .         0.000
 PGD           'C4''  C    .         0.000
 PGD           'O4''  O    .         0.000
 PGD           'C3''  C    .         0.000
 PGD           'O3''  O    .         0.000
 PGD           'C2''  C    .         0.000
 PGD           'O2''  O    .         0.000
 PGD           'C1''  C    .         0.000
 PGD           N9     N    .         0.000
 PGD           C8     C    .         0.000
 PGD           N7     N    .         0.000
 PGD           C5     C    .         0.000
 PGD           C6     C    .         0.000
 PGD           O6     O    .         0.000
 PGD           N1     N    .         0.000
 PGD           C2     C    .         0.000
 PGD           N2     N    .         0.000
 PGD           N3     N    .         0.000
 PGD           C4     C    .         0.000
 PGD           C10    C    .         0.000
 PGD           C11    C    .         0.000
 PGD           O11    O    .         0.000
 PGD           C12    C    .         0.000
 PGD           S12    S    .         0.000
 PGD           C13    C    .         0.000
 PGD           S13    S    .         0.000
 PGD           C14    C    .         0.000
 PGD           N15    N    .         0.000
 PGD           C16    C    .         0.000
 PGD           C17    C    .         0.000
 PGD           O17    O    .         0.000
 PGD           N18    N    .         0.000
 PGD           C19    C    .         0.000
 PGD           N19    N    .         0.000
 PGD           N20    N    .         0.000
 PGD           C21    C    .         0.000
 PGD           N22    N    .         0.000
 PGD           C23    C    .         0.000
 PGD           HOB2   H    .         0.000
 PGD           HOA2   H    .         0.000
 PGD           'H1''  H    .         0.000
 PGD           'H2''  H    .         0.000
 PGD           'H3''  H    .         0.000
 PGD           'H4''  H    .         0.000
 PGD           'HO2'' H    .         0.000
 PGD           'HO3'' H    .         0.000
 PGD           'H5'1' H    .         0.000
 PGD           'H5'2' H    .         0.000
 PGD           H8     H    .         0.000
 PGD           HN1    H    .         0.000
 PGD           HN21   H    .         0.000
 PGD           HN22   H    .         0.000
 PGD           H101   H    .         0.000
 PGD           H102   H    .         0.000
 PGD           H11    H    .         0.000
 PGD           H12    H    .         0.000
 PGD           H13    H    .         0.000
 PGD           H14    H    .         0.000
 PGD           H191   H    .         0.000
 PGD           H192   H    .         0.000
 PGD           H22    H    .         0.000
 PGD           H23    H    .         0.000
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
 PGD        PB     'O5''     single
 PGD        PB     O1B       double
 PGD        PB     O2B       single
 PGD        PB     O3B       single
 PGD        O2B    HOB2      single
 PGD        O3B    PA        single
 PGD        O3A    PA        single
 PGD        O3A    C10       single
 PGD        PA     O1A       double
 PGD        PA     O2A       single
 PGD        O2A    HOA2      single
 PGD        'O5''  'C5''     single
 PGD        'C5''  'C4''     single
 PGD        'C5''  'H5'1'    single
 PGD        'C5''  'H5'2'    single
 PGD        'C4''  'O4''     single
 PGD        'C4''  'C3''     single
 PGD        'C4''  'H4''     single
 PGD        'O4''  'C1''     single
 PGD        'C3''  'O3''     single
 PGD        'C3''  'C2''     single
 PGD        'C3''  'H3''     single
 PGD        'O3''  'HO3''    single
 PGD        'C2''  'O2''     single
 PGD        'C2''  'C1''     single
 PGD        'C2''  'H2''     single
 PGD        'O2''  'HO2''    single
 PGD        'C1''  N9        single
 PGD        'C1''  'H1''     single
 PGD        N9     C8        single
 PGD        N9     C4        single
 PGD        C8     N7        double
 PGD        C8     H8        single
 PGD        N7     C5        single
 PGD        C5     C6        single
 PGD        C5     C4        double
 PGD        C6     O6        double
 PGD        C6     N1        single
 PGD        N1     C2        single
 PGD        N1     HN1       single
 PGD        C2     N2        single
 PGD        C2     N3        double
 PGD        N2     HN21      single
 PGD        N2     HN22      single
 PGD        N3     C4        single
 PGD        C10    C11       single
 PGD        C10    H101      single
 PGD        C10    H102      single
 PGD        C11    C12       single
 PGD        C11    O11       single
 PGD        C11    H11       single
 PGD        O11    C23       single
 PGD        C12    C13       double
 PGD        C12    S12       single
 PGD        S12    H12       single
 PGD        C13    C14       single
 PGD        C13    S13       single
 PGD        S13    H13       single
 PGD        C14    N15       single
 PGD        C14    C23       single
 PGD        C14    H14       single
 PGD        N15    C16       double
 PGD        C16    C17       single
 PGD        C16    C21       single
 PGD        C17    N18       single
 PGD        C17    O17       double
 PGD        N18    C19       double
 PGD        C19    N19       single
 PGD        C19    N20       single
 PGD        N19    H191      single
 PGD        N19    H192      single
 PGD        N20    C21       double
 PGD        C21    N22       single
 PGD        N22    C23       single
 PGD        N22    H22       single
 PGD        C23    H23       single